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  5. Aspi01Gene43820.t1

Aspi01Gene43820.t1 (ATSS4, SS4, SSIV,...)


Aliases : ATSS4, SS4, SSIV, Aspi01Gene43820

Description : starch synthase *(SS4) & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene43820.t1

Target Alias Description ECC score Gene Family Method Actions
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.03 OrthoFinder output from all 47 species
Aev_g19510 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05131 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g11092 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32631.t1 ATSS3, SS3,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene43821.t1 ATSS4, SS4,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000667 ATSS4, SS4, SSIV not classified & original description: CDS=177-2066 0.05 OrthoFinder output from all 47 species
Cba_g33306 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G125000.1 ATSS4, SS4,... starch synthase *(SS4) & original description:... 0.03 OrthoFinder output from all 47 species
Cre13.g579598 ATSS3, SS3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Cre16.g665800 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder output from all 47 species
Dcu_g08981 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g53310.1 ATSS3, SS3,... starch synthase (SSIII) 0.02 OrthoFinder output from all 47 species
Len_g49747 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40269 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
MA_675870g0010 ATSS3, SS3 Soluble starch synthase 3, chloroplastic/amyloplastic... 0.02 OrthoFinder output from all 47 species
Mp2g08030.1 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.04 OrthoFinder output from all 47 species
Mp2g20000.1 ATSS3, SS3 starch synthase (SSIII) 0.03 OrthoFinder output from all 47 species
Msp_g24463 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c15_14210V3.1 ATSS4, SS4,... starch synthase 4 0.02 OrthoFinder output from all 47 species
Smo154776 ATSS3, SS3 Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Solyc02g071040.3.1 ATSS4, SS4,... starch synthase (SSIV) 0.03 OrthoFinder output from all 47 species
Solyc02g080570.3.1 ATSS3, SS3,... starch synthase (SSIII) 0.02 OrthoFinder output from all 47 species
Zm00001e027473_P001 ATSS4, SS4,... starch synthase (SSIV) 0.03 OrthoFinder output from all 47 species
Zm00001e041682_P002 ATSS3, SS3,... starch synthase (SSIII) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 404 643
No external refs found!