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  5. Aspi01Gene43660.t1

Aspi01Gene43660.t1 (RNA_POL_II_LSRNA_POL_I...)


Aliases : RNA_POL_II_LSRNA_POL_II_LS, NRPB1, RPB1, RNA_POL_II_LS, Aspi01Gene43660

Description : not classified & original description: none


Gene families : OG0003577 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003577_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene43660.t1
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
Adi_g039693 RNA_POL_II_LSRNA_... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16196.t1 RNA_POL_II_LSRNA_... component *(NRPB1) of RNA polymerase II complex &... 0.08 OrthoFinder output from all 47 species
Aspi01Gene39504.t1 RNA_POL_II_LSRNA_... component *(NRPB1) of RNA polymerase II complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0993.g094765 RNA_POL_II_LSRNA_... component *(NRPB1) of RNA polymerase II complex &... 0.03 OrthoFinder output from all 47 species
Spa_g02700 RNA_POL_II_LSRNA_... not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007075 RNA_pol_Rpb1_6 618 799
IPR007073 RNA_pol_Rpb1_7 884 1017
IPR007081 RNA_pol_Rpb1_5 800 1068
No external refs found!