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  5. Aspi01Gene43392.t1

Aspi01Gene43392.t1 (Aspi01Gene43392)


Aliases : Aspi01Gene43392

Description : TCP-type transcription factor & original description: none


Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene43392.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00081210 AT-TCP20, TCP20,... RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
AT5G23280 No alias TCP family transcription factor 0.06 OrthoFinder output from all 47 species
Adi_g108415 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12872 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26686 AT-TCP20, TCP20,... TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008023001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01020011001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.04 OrthoFinder output from all 47 species
GSVIVT01023283001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
LOC_Os12g07480.1 LOC_Os12g07480 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Len_g15010 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428794g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_635g0010 AtTCP14, TCP14 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Mp7g09490.1 No alias transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Pnu_g02433 AtTCP14, TCP14 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06765 No alias TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo441321 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
Solyc03g006800.1.1 Solyc03g006800 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Solyc03g116320.3.1 AtTCP14, TCP14,... transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Solyc06g070900.3.1 AtTCP14, TCP14,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc09g008030.1.1 Solyc09g008030 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e015209_P001 Zm00001e015209 transcription factor (TCP). CHE circadian clock repression factor 0.04 OrthoFinder output from all 47 species
Zm00001e024509_P001 Zm00001e024509 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 86 266
No external refs found!