Solyc01g109200.3.1 (Solyc01g109200.3)


Aliases : Solyc01g109200.3

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g109200.3.1
Cluster HCCA cluster: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.02 Gene family
LOC_Os05g11860 No alias No description available 0.01 Gene family
LOC_Os05g40020 Os05g0478000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os06g14650 No alias No description available 0.01 Gene family
LOC_Os06g34400 Os06g0534900,... No description available 0.01 Gene family
MA_201864g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_226198g0010 No alias No description available 0.02 Gene family
MA_43543g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Solyc01g006910.3.1 Solyc01g006910.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc01g096650.3.1 Solyc01g096650.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc03g033330.3.1 Solyc03g033330.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
Solyc04g082690.1.1 Solyc04g082690.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.04 Gene family
Solyc05g055390.3.1 Solyc05g055390.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Solyc06g061250.2.1 Solyc06g061250.2 27.3.99 RNA.regulation of transcription.unclassified... 0.02 Gene family
Zm00001d002655 No alias 2.2.1.5 major CHO metabolism.degradation.sucrose.Susy... 0.06 Gene family
Zm00001d016104 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 192 235
No external refs found!