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  5. Aspi01Gene42787.t1

Aspi01Gene42787.t1 (ATPGP4, PGP4, ABCB4,...)


Aliases : ATPGP4, PGP4, ABCB4, MDR4, Aspi01Gene42787

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene42787.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00263610 ABCB19,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00254310 ABCB19,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00045p00108620 PGP11,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00045p00109790 PGP11,... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00045p00109940 PGP11,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00048p00046670 PGP2,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00128390 PGP16,... ABC transporter B family member 16 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00049p00128460 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00076p00195870 PGP1, ABCB1,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00090p00165440 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT1G27940 PGP13 P-glycoprotein 13 0.07 OrthoFinder output from all 47 species
AT1G28010 ABCB14, ATABCB14, PGP14 P-glycoprotein 14 0.02 OrthoFinder output from all 47 species
AT3G28345 No alias ABC transporter family protein 0.06 OrthoFinder output from all 47 species
AT3G28415 No alias ABC transporter family protein 0.04 OrthoFinder output from all 47 species
AT4G18050 PGP9 P-glycoprotein 9 0.03 OrthoFinder output from all 47 species
AT4G25960 PGP2 P-glycoprotein 2 0.03 OrthoFinder output from all 47 species
Adi_g021749 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025752 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g029160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056640 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056650 ABCB19,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g058585 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087061 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113233 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15212 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g26381 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05763 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07131 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07510 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07511 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12027 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14091 ATPGP4, PGP4, ABCB4, MDR4 subfamily ABCB transporter & original description: none 0.07 OrthoFinder output from all 47 species
Als_g14092 PGP21 subfamily ABCB transporter & original description: none 0.07 OrthoFinder output from all 47 species
Als_g28385 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g22201 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11005 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14003 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22258 PGP2 subfamily ABCB transporter & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g29915 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68609 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08453.t1 PGP11, Aspi01Gene08453 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene32170.t1 ABCB14,... subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G084300.1 ABCB19,... subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.06G076400.1 ABCB19,... subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.07G010800.1 PGP11, Ceric.07G010800 subfamily ABCB transporter & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.18G013800.1 Ceric.18G013800 subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.34G053700.1 PGP2, Ceric.34G053700 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.38G058800.1 PGP2, Ceric.38G058800 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cre17.g725150 ATPGP4, PGP4, ABCB4, MDR4 ABC transporter B family member 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g06939 PGP13 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13985 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14063 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35627 PGP2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40237 ABCB19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12428 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20621 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26046 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40826 PGP2 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g41879 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g28161 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30303 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31525 ATPGP4, PGP4, ABCB4, MDR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46023 PGP13 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g13730 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13758 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g27838 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000580001 No alias ABC transporter B family member 15 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01006613001 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01009946001 ABCB14, ATABCB14, PGP14 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01015306001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01021365001 PGP9 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01028256001 PGP11 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Gb_02468 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_10211 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_10216 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_13906 PGP2 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_13908 PGP10 ABC transporter B family member 10 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_13909 PGP2 ABC transporter B family member 2 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Gb_36497 No alias subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Gb_38960 PGP11 subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
LOC_Os01g74630.1 PGP11, LOC_Os01g74630 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09720.1 LOC_Os02g09720 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g21750.1 PGP11, LOC_Os02g21750 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os02g46680.1 PGP2, LOC_Os02g46680 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os04g38570.1 ABCB19,... auxin efflux transporter (ABCB19) 0.02 OrthoFinder output from all 47 species
LOC_Os04g54930.1 ABCB19,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Len_g23455 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19020 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431815g0020 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_10432922g0010 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
MA_178534g0010 PGP2 ABC transporter B family member 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_18863g0020 PGP3, MDR3 ABC transporter B family member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_3448627g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6870g0010 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
MA_82945g0030 PGP17 ABC transporter B family member 17 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_934204g0010 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp2g06270.1 PGP20 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp2g11920.1 ABCB19,... subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Mp3g11830.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mpzg01120.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g31505 PGP11 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35589 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44193 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02480 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03862 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04453 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27262 PGP13 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32847 PGP21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19207 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28855 PGP10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29842 PGP10 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33236 ABCB19,... ABC-B-type transporter *(AMN3) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35743 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38310 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42482 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43029 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04029 PGP11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47038 PGP9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49419 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60074 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60650 PGP21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_16450V3.1 ABCB19,... ATP binding cassette subfamily B19 0.02 OrthoFinder output from all 47 species
Ppi_g03284 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04001 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07008 ABCB14, ATABCB14, PGP14 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17653 PGP1, ABCB1, ATPGP1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17867 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60298 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035 PGP13 subfamily ABCB transporter & original description: CDS=555-4511 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014291 PGP2 subfamily ABCB transporter & original description: CDS=1-4248 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197 No alias subfamily ABCB transporter & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020710 ABCB19,... not classified & original description: CDS=1-1380 0.03 OrthoFinder output from all 47 species
Smo148837 ABCB19,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo169182 ATPGP4, PGP4, ABCB4, MDR4 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo229984 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo230688 ABCB19,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo231714 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo233433 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Smo92485 ABCB19,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo99885 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc06g009280.1.1 PGP11, Solyc06g009280 subfamily ABCB transporter 0.06 OrthoFinder output from all 47 species
Solyc06g009290.4.1 PGP21, Solyc06g009290 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc08g076720.4.1 PGP2, Solyc08g076720 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Solyc11g067300.2.1 PGP11, Solyc11g067300 subfamily ABCB transporter 0.05 OrthoFinder output from all 47 species
Spa_g09413 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47519 PGP2 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56665 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06699 PGP2 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g06701 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08541 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12815 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35652 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g38947 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003866_P001 PGP1, ABCB1,... subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Zm00001e020073_P001 ATPGP4, PGP4,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e025063_P001 Zm00001e025063 subfamily ABCB transporter 0.01 OrthoFinder output from all 47 species
Zm00001e041008_P003 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1033 1181
IPR011527 ABC1_TM_dom 694 965
IPR011527 ABC1_TM_dom 31 302
IPR003439 ABC_transporter-like_ATP-bd 373 520
No external refs found!