Aspi01Gene42303.t1 (Aspi01Gene42303)

Aliases : Aspi01Gene42303

Description : pectin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene42303.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00085870	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
AT2G36710	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G26810	No alias	Pectin lyase-like superfamily protein	0.03	OrthoFinder output from all 47 species
Aev_g39532	No alias	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g16581	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g12101	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g47599	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Als_g56348	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g24120	No alias	pectin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g69965	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49142.t1	Aspi01Gene49142	pectin methylesterase & original description: none	0.06	OrthoFinder output from all 47 species
Azfi_s0002.g001228	No alias	pectin methylesterase & original description: CDS=1-1122	0.02	OrthoFinder output from all 47 species
Ceric.10G069000.1	Ceric.10G069000	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.10G071300.1	Ceric.10G071300	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.11G006900.1	Ceric.11G006900	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.11G008400.1	Ceric.11G008400	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.36G035900.1	Ceric.36G035900	pectin methylesterase & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.37G019300.1	Ceric.37G019300	pectin methylesterase & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g11729	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Gb_01459	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
LOC_Os01g53990.1	LOC_Os01g53990	pectin methylesterase	0.03	OrthoFinder output from all 47 species
LOC_Os05g44600.1	LOC_Os05g44600	pectin methylesterase	0.05	OrthoFinder output from all 47 species
MA_18312g0010	ATPE11, PE11	pectin methylesterase	0.03	OrthoFinder output from all 47 species
MA_19196g0010	ATPE11, PE11	pectin methylesterase	0.03	OrthoFinder output from all 47 species
MA_304854g0010	ATPE11, PE11	pectin methylesterase	0.03	OrthoFinder output from all 47 species
MA_6149868g0010	No alias	pectin methylesterase	0.02	OrthoFinder output from all 47 species
Mp4g01190.1	No alias	pectin methylesterase	0.03	OrthoFinder output from all 47 species
Msp_g06289	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g08012	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g14779	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005602	No alias	pectin methylesterase & original description: CDS=911-2185	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091	No alias	pectin methylesterase & original description: CDS=1-882	0.03	OrthoFinder output from all 47 species
Tin_g43829	No alias	pecTin methylesterase & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e029074_P001	Zm00001e029074	pectin methylesterase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	104	400

External Links

No external refs found!

Aspi01Gene42303.t1 (Aspi01Gene42303)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation