Solyc01g107910.3.1 (Solyc01g107910.3)


Aliases : Solyc01g107910.3

Description : 16.2.1.6 secondary metabolism.phenylpropanoids.lignin biosynthesis.CCoAOMT caffeoyl coenzyme A O-methyltransferase 1 (CCoAOMT1)


Gene families : OG_01_0000242 (Gene family) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g107910.3.1
Cluster HCCA cluster: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT4G34050 CCoAOMT1 S-adenosyl-L-methionine-dependent methyltransferases... 0.07 Gene family
GSVIVT01010468001 No alias 16.2.1.6 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
GSVIVT01010469001 No alias 16.2.1.6 secondary metabolism.phenylpropanoids.lignin... 0.03 Gene family
GSVIVT01022100001 No alias 16.2.1.6 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
GSVIVT01031715001 No alias 16.2.1.6 secondary metabolism.phenylpropanoids.lignin... 0.09 Gene family
LOC_Os08g38900 Os08g0498100 16.2.1.6 secondary metabolism.phenylpropanoids.lignin... 0.05 Gene family
LOC_Os08g38910 Os08g0498400 16.2.1.6 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
Smo271191 PACid_15420987 No description available 0.02 Gene family
Smo405144 PACid_15410861 No description available 0.02 Gene family
Solyc02g093250.3.1 Solyc02g093250.3 16.2.1.6 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family
Zm00001d036293 GRMZM2G127948 16.2.1.6 secondary metabolism.phenylpropanoids.lignin... 0.04 Gene family
Zm00001d052842 GRMZM2G033952 16.2.1.6 secondary metabolism.phenylpropanoids.lignin... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008171 O-methyltransferase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002935 SAM_O-MeTrfase 35 247
No external refs found!