Aspi01Gene41197.t2 (Aspi01Gene41197)

Aliases : Aspi01Gene41197

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene41197.t2

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00105p00126340	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
Aob_g19239	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g22283	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01019978001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.03	OrthoFinder output from all 47 species
Nbi_g09753	No alias	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g079530.4.1	Solyc01g079530	RING-v-class E3 ligase	0.03	OrthoFinder output from all 47 species
Spa_g30245	No alias	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g37701	No alias	E3 ubiquiTin ligase & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR022143	DUF3675	111	230
IPR011016	Znf_RING-CH	59	104

External Links

No external refs found!