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  5. Aspi01Gene40930.t1

Aspi01Gene40930.t1 (Aspi01Gene40930)


Aliases : Aspi01Gene40930

Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene40930.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00073920 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
AT1G69710 No alias Regulator of chromosome condensation (RCC1) family with... 0.02 OrthoFinder output from all 47 species
AT1G76950 PRAF1 Regulator of chromosome condensation (RCC1) family with... 0.03 OrthoFinder output from all 47 species
Als_g16321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01001675001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01035215001 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.01 OrthoFinder output from all 47 species
LOC_Os04g58960.1 PRAF1, LOC_Os04g58960 PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Pir_g16098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007456_P003 PRAF1, Zm00001e007456 PH, RCC1 and FYVE domains-containing protein 1... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027988 BRX_N 751 778
IPR000408 Reg_chr_condens 273 322
IPR000408 Reg_chr_condens 337 386
IPR000408 Reg_chr_condens 218 269
IPR000408 Reg_chr_condens 167 215
IPR000408 Reg_chr_condens 389 438
IPR000408 Reg_chr_condens 443 490
IPR000306 Znf_FYVE 494 560
IPR013591 Brevis_radix_dom 901 931
No external refs found!