Aspi01Gene40719.t1 (GRP2B, ATGRP2B,...)

Aliases : GRP2B, ATGRP2B, ATCSP4, Aspi01Gene40719

Description : cold-responsive mRNA chaperone *(CSD) & original description: none

Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene40719.t1

Target	Alias	Description	ECC score	Gene Family Method
Len_g09990	ATCSP2, GRP2, CSDP2, CSP2	cold-responsive mRNA chaperone *(CSD) & original...	0.04	OrthoFinder output from all 47 species
Pnu_g20698	ATCSP2, GRP2, CSDP2, CSP2	cold-responsive mRNA chaperone *(CSD) & original...	0.03	OrthoFinder output from all 47 species
Sam_g06106	No alias	cold-responsive mRNA chaperone *(CSD) & original...	0.03	OrthoFinder output from all 47 species
Solyc10g055250.1.1	ATCSP2, GRP2,...	RNA chaperone (CSP). mRNA chaperone (CSD)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002059	CSP_DNA-bd	205	268
IPR025724	GAG-pre-integrase_dom	120	186
IPR001878	Znf_CCHC	352	368
IPR001878	Znf_CCHC	437	453

External Links

No external refs found!