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  5. Aspi01Gene40502.t1

Aspi01Gene40502.t1 (Aspi01Gene40502)


Aliases : Aspi01Gene40502

Description : component *(uS4) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene40502.t1

Target Alias Description ECC score Gene Family Method Actions
Cre08.g359750 No alias 40S ribosomal protein S9-1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g23791 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dde_g15335 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
GSVIVT01020020001 No alias 40S ribosomal protein S9-2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os03g05980.1 LOC_Os03g05980 component RPS9 of SSU proteome 0.03 OrthoFinder output from all 47 species
MA_10429805g0030 No alias component RPS9 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp3g00520.1 No alias component RPS9 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp6g10930.1 No alias component RPS9 of SSU proteome 0.02 OrthoFinder output from all 47 species
Msp_g41355 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Pp3c12_9190V3.1 Pp3c12_9190 Ribosomal protein S4 0.03 OrthoFinder output from all 47 species
Pp3c4_15290V3.1 Pp3c4_15290 Ribosomal protein S4 0.02 OrthoFinder output from all 47 species
Sam_g09460 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g24238 No alias component *(uS4) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e018345_P001 Zm00001e018345 component RPS9 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0019843 rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001912 Ribosomal_S4/S9_N 8 108
IPR002942 S4_RNA-bd 109 152
No external refs found!