Solyc01g106280.3.1 (Solyc01g106280.3)

Aliases : Solyc01g106280.3

Description : 27.3.52 RNA.regulation of transcription.Global transcription factor group This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation. global transcription factor group E7 (GTE7)

Gene families : OG_01_0000231 (Gene family) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g106280.3.1
Cluster HCCA cluster: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AT1G73150 GTE3 global transcription factor group E3 0.02 Gene family
AT3G27260 GTE8 global transcription factor group E8 0.03 Gene family
GSVIVT01008492001 No alias 35.2 not assigned.unknown Encodes NPX1 (Nuclear Protein... 0.03 Gene family
GSVIVT01038522001 No alias 27.3.52 RNA.regulation of transcription.Global... 0.05 Gene family
Zm00001d046528 No alias 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001487 Bromodomain 196 274
IPR027353 NET_dom 408 470
No external refs found!