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  5. Aspi01Gene39886.t1

Aspi01Gene39886.t1 (Aspi01Gene39886)


Aliases : Aspi01Gene39886

Description : pectin acetylesterase *(PAE) & original description: none


Gene families : OG0000637 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene39886.t1
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT3G05910 No alias Pectinacetylesterase family protein 0.05 OrthoFinder output from all 47 species
Aob_g03038 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11910 No alias pectin acetylesterase *(PAE) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0080.g038513 No alias pectin acetylesterase *(PAE) & original description: CDS=1-1116 0.04 OrthoFinder output from all 47 species
GSVIVT01028230001 No alias Cell wall.pectin.modification and degradation.pectin... 0.02 OrthoFinder output from all 47 species
GSVIVT01036914001 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
LOC_Os01g66830.1 LOC_Os01g66830 pectin acetylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os10g40290.1 LOC_Os10g40290 Pectin acetylesterase 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g15514 No alias pectin acetylesterase *(PAE) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38305 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo271371 No alias Cell wall.pectin.modification and degradation.pectin... 0.03 OrthoFinder output from all 47 species
Spa_g54208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 53 396
No external refs found!