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  5. Aspi01Gene39876.t1

Aspi01Gene39876.t1 (LPA3, Aspi01Gene39876)


Aliases : LPA3, Aspi01Gene39876

Description : protein involved in PS-II assembly *(LPA3) & original description: none


Gene families : OG0005820 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005820_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene39876.t1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00143330 LPA3,... Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
AT1G73060 LPA3 Low PSII Accumulation 3 0.05 OrthoFinder output from all 47 species
Azfi_s0472.g072941 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.04 OrthoFinder output from all 47 species
Cba_g08348 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g15282 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01015969001 LPA3 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
LOC_Os02g02520.1 LPA3, LOC_Os02g02520 LPA3 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Len_g30874 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.04 OrthoFinder output from all 47 species
Ore_g06511 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g068480.3.1 LPA3, Solyc06g068480 LPA3 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Zm00001e013465_P002 LPA3, Zm00001e013465 LPA3 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018962 DUF1995 102 260
No external refs found!