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  5. Aspi01Gene39761.t1

Aspi01Gene39761.t1 (Aspi01Gene39761)


Aliases : Aspi01Gene39761

Description : not classified & original description: none


Gene families : OG0004930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene39761.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00074820 SVR7,... Pentatricopeptide repeat-containing protein At4g16390,... 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00067630 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46580,... 0.02 OrthoFinder output from all 47 species
AMTR_s00149p00067730 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g113698 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g01055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G014300.1 Ceric.15G014300 not classified & original description: pacid=50639905... 0.03 OrthoFinder output from all 47 species
GSVIVT01003496001 SVR7 Pentatricopeptide repeat-containing protein At4g16390,... 0.01 OrthoFinder output from all 47 species
Len_g02383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01171 SVR7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000850_P001 SVR7, Zm00001e000850 Pentatricopeptide repeat-containing protein ATP4,... 0.03 OrthoFinder output from all 47 species
Zm00001e006409_P001 Zm00001e006409 Pentatricopeptide repeat-containing protein At5g46580,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 308 357
IPR002885 Pentatricopeptide_repeat 207 252
IPR002885 Pentatricopeptide_repeat 418 446
IPR002885 Pentatricopeptide_repeat 381 409
IPR002885 Pentatricopeptide_repeat 454 480
IPR002885 Pentatricopeptide_repeat 172 201
No external refs found!