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  5. Aspi01Gene39475.t2

Aspi01Gene39475.t2 (Aspi01Gene39475)


Aliases : Aspi01Gene39475

Description : not classified & original description: none


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene39475.t2
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00115860 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G54770 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 OrthoFinder output from all 47 species
AT5G11412 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 OrthoFinder output from all 47 species
Ceric.23G019900.1 Ceric.23G019900 not classified & original description: pacid=50610174... 0.04 OrthoFinder output from all 47 species
Dac_g11098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g11730.1 LOC_Os06g11730 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g03686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_1682g0010 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp8g04430.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pir_g03322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g049920.4.1 Solyc04g049920 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g08652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001294_P001 Zm00001e001294 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 26 83
No external refs found!