Solyc01g105230.3.1 (Solyc01g105230.3)


Aliases : Solyc01g105230.3

Description : 27.3.39 RNA.regulation of transcription.AtSR Transcription Factor family Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains


Gene families : OG_01_0000629 (Gene family) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g105230.3.1
Cluster HCCA cluster: Cluster_289

Target Alias Description ECC score Gene Family Method Actions
AT1G67310 No alias Calmodulin-binding transcription activator protein with... 0.03 Gene family
AT2G22300 CAMTA3, SR1 signal responsive 1 0.03 Gene family
AT5G64220 No alias Calmodulin-binding transcription activator protein with... 0.03 Gene family
GSVIVT01004860001 No alias 27.3.39 RNA.regulation of transcription.AtSR... 0.07 Gene family
LOC_Os03g09100 Os03g0191000 27.3.39 RNA.regulation of transcription.AtSR... 0.03 Gene family
LOC_Os04g31900 Os04g0388500 30.11 signalling.light Calmodulin-binding transcription... 0.06 Gene family
LOC_Os10g22950 Os10g0375600 27.3.39 RNA.regulation of transcription.AtSR... 0.03 Gene family
Smo441667 PACid_15409450 No description available 0.02 Gene family
Zm00001d014286 GRMZM2G341747 27.3.39 RNA.regulation of transcription.AtSR... 0.06 Gene family
Zm00001d030518 GRMZM2G153594 27.3.39 RNA.regulation of transcription.AtSR... 0.04 Gene family
Zm00001d047209 GRMZM2G431243 27.3.39 RNA.regulation of transcription.AtSR... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002909 IPT_dom 448 533
IPR000048 IQ_motif_EF-hand-BS 881 900
IPR000048 IQ_motif_EF-hand-BS 857 876
IPR005559 CG-1_dom 22 134
No external refs found!