Aliases : ARF16, Aspi01Gene38983
Description : ARF-type transcription factor & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aspi01Gene38983.t1 | |
Cluster | HCCA: Cluster_24 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00157690 | ARF6,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00061p00077000 | ARF18,... | Auxin response factor 18 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00211p00025860 | MP, IAA24, ARF5,... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
AT1G30330 | ARF6 | auxin response factor 6 | 0.05 | OrthoFinder output from all 47 species | |
Adi_g014256 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g061151 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g14726 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene02982.t1 | ARF6, Aspi01Gene02982 | ARF-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene61150.t1 | ARF16, Aspi01Gene61150 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene64733.t1 | HSS, ARF1-BP,... | ARF-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Ceric.30G022300.1 | ARF6, Ceric.30G022300 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g20944 | ARF16 | ARF-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dcu_g27461 | ARF6 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g08681 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g09204 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032251001 | ARF19, IAA22, ARF11 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g06910.1 | ARF6, LOC_Os02g06910 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g35140.1 | ARF1, LOC_Os02g35140 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g57610.1 | ARF8, ATARF8,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Len_g01404 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g14944 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Mp1g07070.1 | ARF10 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Mp1g12750.1 | ARF6 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g15857 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g13614 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g30357 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g33112 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g19455 | ARF6 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0204.g025692 | ARF10 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g042260.4.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013191_P001 | ARF19, IAA22,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e016366_P002 | ARF11, Zm00001e016366 | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
BP | GO:0009725 | response to hormone | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |