Solyc01g104950.3.1 (Solyc01g104950.3)


Aliases : Solyc01g104950.3

Description : 10.6.2 cell wall.degradation.mannan-xylose-arabinose-fucose Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases. beta-D-xylosidase 4 (XYL4)


Gene families : OG_01_0000215 (Gene family) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g104950.3.1
Cluster HCCA cluster: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT5G09730 BXL3, BX3, XYL3,... beta-xylosidase 3 0.02 Gene family
LOC_Os11g18730 Os11g0291450,... 10.6.2 cell... 0.03 Gene family
LOC_Os11g19160 Os11g0297300 10.6.2 cell... 0.02 Gene family
MA_10426142g0010 No alias 10.6.2 cell... 0.02 Gene family
Smo419541 PACid_15410480 No description available 0.02 Gene family
Zm00001d026415 GRMZM2G136895 10.6.2 cell... 0.03 Gene family
Zm00001d052792 GRMZM2G044107 10.6.2 cell... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan
BP GO:0005975 carbohydrate metabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 413 641
IPR001764 Glyco_hydro_3_N 124 367
IPR026891 Fn3-like 702 769
No external refs found!