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  5. Aspi01Gene38813.t1

Aspi01Gene38813.t1 (NTMC2T1.2, SYTB,...)


Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB, Aspi01Gene38813

Description : membrane tethering protein (SYT1) of ER-cytoskeleton-plasmamembrane interface & original description: none


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene38813.t1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT3G61050 NTMC2TYPE4, NTMC2T4 Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Adi_g012486 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Ceric.01G110500.1 NTMC2TYPE4,... not classified & original description: pacid=50591328... 0.04 OrthoFinder output from all 47 species
Ceric.02G074800.1 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.03 OrthoFinder output from all 47 species
Mp3g04670.1 NTMC2TYPE4, NTMC2T4 Synaptotagmin-4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp3g04720.1 NTMC2TYPE4, NTMC2T4 Synaptotagmin-4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g18414 SYT5, NTMC2T2.1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015422 NTMC2TYPE4, NTMC2T4 component *(CPSF100/Ydh1) of Cleavage and... 0.03 OrthoFinder output from all 47 species
Sam_g19845 No alias membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Sam_g51874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g009695.1.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g009790.2.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e010861_P001 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000008 C2_dom 366 466
IPR000008 C2_dom 520 620
IPR039010 Synaptotagmin_SMP 171 348
No external refs found!