Solyc01g104840.3.1 (Solyc01g104840.3)


Aliases : Solyc01g104840.3

Description : 27.4 RNA.RNA binding Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. ATRZ-1A


Gene families : OG_01_0000053 (Gene family) Phylogenetic Tree(s): OG0000053_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g104840.3.1
Cluster HCCA cluster: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT1G18630 GR-RBP6 glycine-rich RNA-binding protein 6 0.04 Gene family
AT1G60650 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 Gene family
AT1G74230 GR-RBP5 glycine-rich RNA-binding protein 5 0.03 Gene family
AT3G23830 GR-RBP4, GRP4 glycine-rich RNA-binding protein 4 0.09 Gene family
AT3G26420 ATRZ-1A RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 Gene family
AT5G61030 GR-RBP3 glycine-rich RNA-binding protein 3 0.04 Gene family
Cre02.g079400 No alias No description available 0.02 Gene family
GSVIVT01001672001 No alias 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.02 Gene family
GSVIVT01007865001 No alias 27.4 RNA.RNA binding encodes a glycine-rich RNA binding... 0.02 Gene family
GSVIVT01014553001 No alias 27.4 RNA.RNA binding RNA-binding (RRM/RBD/RNP motifs)... 0.05 Gene family
GSVIVT01021024001 No alias 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.05 Gene family
LOC_Os03g61990 Os03g0836200 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.03 Gene family
MA_10435321g0010 No alias 27.4 RNA.RNA binding Encodes a small glycine-rich RNA... 0.03 Gene family
Smo140819 PACid_15409716 No description available 0.04 Gene family
Smo406315 PACid_15415256 No description available 0.02 Gene family
Zm00001d012052 GRMZM2G042118,... 27.4 RNA.RNA binding Encodes a glycine-rich RNA-binding... 0.06 Gene family
Zm00001d019041 No alias 27.4 RNA.RNA binding Zinc finger-containing glycine-rich... 0.03 Gene family
Zm00001d033511 GRMZM2G083783 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001878 Znf_CCHC 131 140
IPR000504 RRM_dom 10 78
No external refs found!