Solyc01g104550.3.1 (Solyc01g104550.3)


Aliases : Solyc01g104550.3

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family member of WRKY Transcription Factor Group II-b WRKY DNA-binding protein 9 (WRKY9)


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g104550.3.1
Cluster HCCA cluster: Cluster_200

Target Alias Description ECC score Gene Family Method Actions
AT1G18860 WRKY61, ATWRKY61 WRKY DNA-binding protein 61 0.03 Gene family
AT1G29280 ATWRKY65, WRKY65 WRKY DNA-binding protein 65 0.02 Gene family
AT1G29860 ATWRKY71, WRKY71 WRKY DNA-binding protein 71 0.04 Gene family
AT1G64000 WRKY56, ATWRKY56 WRKY DNA-binding protein 56 0.02 Gene family
AT1G66550 WRKY67, ATWRKY67 WRKY DNA-binding protein 67 0.05 Gene family
AT1G80590 WRKY66, ATWRKY66 WRKY DNA-binding protein 66 0.04 Gene family
AT2G40740 WRKY55, ATWRKY55 WRKY DNA-binding protein 55 0.03 Gene family
AT3G01080 ATWRKY58, WRKY58 WRKY DNA-binding protein 58 0.03 Gene family
AT4G11070 AtWRKY41, WRKY41 WRKY family transcription factor 0.03 Gene family
AT4G23810 WRKY53, ATWRKY53 WRKY family transcription factor 0.03 Gene family
AT4G31550 ATWRKY11, WRKY11 WRKY DNA-binding protein 11 0.03 Gene family
AT5G13080 WRKY75, ATWRKY75 WRKY DNA-binding protein 75 0.02 Gene family
AT5G46350 WRKY8, ATWRKY8 WRKY DNA-binding protein 8 0.03 Gene family
GSVIVT01022245001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01028129001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
MA_10426942g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_10432362g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_10433300g0020 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.06 Gene family
MA_126273g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_133396g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_20468g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_212937g0010 No alias No description available 0.02 Gene family
MA_23415g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_74833g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Smo77979 PACid_15422458 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc02g032950.3.1 Solyc02g032950.3 No description available 0.03 Gene family
Solyc02g072190.3.1 Solyc02g072190.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc03g007380.2.1 Solyc03g007380.2 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Solyc10g009550.3.1 Solyc10g009550.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d008793 GRMZM2G516301 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d043663 GRMZM2G101405 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 226 285
No external refs found!