Aspi01Gene38374.t1 (Aspi01Gene38374)


Aliases : Aspi01Gene38374

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene38374.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00045930 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.03 OrthoFinder output from all 47 species
AMTR_s00103p00113040 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g65570... 0.03 OrthoFinder output from all 47 species
AT3G20730 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G47840 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g013826 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g23888 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42174 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12498 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0002.g001620 No alias not classified & original description: CDS=1-4653 0.04 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034666 No alias not classified & original description: CDS=1-1770 0.05 OrthoFinder output from all 47 species
Ceric.01G053600.1 Ceric.01G053600 not classified & original description: pacid=50592089... 0.03 OrthoFinder output from all 47 species
Dac_g08179 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16664 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g41902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51283 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01033906001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.02 OrthoFinder output from all 47 species
Len_g17777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18308 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03998 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07471 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17481 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g18691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02784 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g28912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g003970 No alias not classified & original description: CDS=1-3009 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005530 CRR22 not classified & original description: CDS=1-2547 0.03 OrthoFinder output from all 47 species
Sam_g09876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo119202 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Smo126194 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
Smo26993 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Smo45004 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.03 OrthoFinder output from all 47 species
Solyc12g096680.1.1 REME1, Solyc12g096680 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
Spa_g05652 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42246 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05854 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23237 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR046848 E_motif 198 241
IPR002885 Pentatricopeptide_repeat 80 126
IPR002885 Pentatricopeptide_repeat 154 178
IPR002885 Pentatricopeptide_repeat 53 74
No external refs found!