AMTR_s00110p00096490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.56

Description : Vesicle trafficking.SNARE target membrane recognition and fusion complexes.Qbc-type SNARE components.SNAP25 group protein


Gene families : OG_01_0002218 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002218_tree ,
OG_02_0001696 (LandPlants) Phylogenetic Tree(s): OG_02_0001696_tree ,
OG_03_0002067 (SeedPlants) Phylogenetic Tree(s): OG_03_0002067_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00096490
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G13890 SNAP30, ATSNAP30 soluble N-ethylmaleimide-sensitive factor adaptor protein 30 0.02 Archaeplastida
AT5G61210 SNP33, SNAP33,... soluble N-ethylmaleimide-sensitive factor adaptor protein 33 0.03 Archaeplastida
GSVIVT01007921001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.04 Archaeplastida
GSVIVT01012200001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
LOC_Os02g24080.4 No alias SNAP25 group Qbc-type SNARE protein 0.08 Archaeplastida
LOC_Os02g32740.1 No alias SNAP25 group Qbc-type SNARE protein 0.03 Archaeplastida
Smo35623 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Solyc06g069570.3.1 No alias SNAP25 group Qbc-type SNARE protein 0.06 Archaeplastida
Zm00001e014712_P003 No alias SNAP25 group Qbc-type SNARE protein 0.02 Archaeplastida
Zm00001e033374_P002 No alias SNAP25 group Qbc-type SNARE protein 0.04 Archaeplastida
AT5G61210 SNP33, SNAP33,... soluble N-ethylmaleimide-sensitive factor adaptor protein 33 0.03 LandPlants
GSVIVT01007921001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 LandPlants
GSVIVT01012200001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 LandPlants
LOC_Os02g24080.4 No alias SNAP25 group Qbc-type SNARE protein 0.05 LandPlants
LOC_Os02g32740.1 No alias SNAP25 group Qbc-type SNARE protein 0.03 LandPlants
Smo35623 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 LandPlants
Solyc06g069570.3.1 No alias SNAP25 group Qbc-type SNARE protein 0.06 LandPlants
Zm00001e014712_P003 No alias SNAP25 group Qbc-type SNARE protein 0.02 LandPlants
Zm00001e033374_P002 No alias SNAP25 group Qbc-type SNARE protein 0.04 LandPlants
AT1G13890 SNAP30, ATSNAP30 soluble N-ethylmaleimide-sensitive factor adaptor protein 30 0.01 SeedPlants
GSVIVT01007921001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 SeedPlants
LOC_Os02g24080.4 No alias SNAP25 group Qbc-type SNARE protein 0.04 SeedPlants
LOC_Os02g32740.1 No alias SNAP25 group Qbc-type SNARE protein 0.03 SeedPlants
Solyc06g069570.3.1 No alias SNAP25 group Qbc-type SNARE protein 0.03 SeedPlants
Zm00001e014712_P003 No alias SNAP25 group Qbc-type SNARE protein 0.02 SeedPlants
Zm00001e033374_P002 No alias SNAP25 group Qbc-type SNARE protein 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 352 412
No external refs found!