- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Aspi01Gene37377
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00138570 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00113430 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g18485... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00016p00252350 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g22690... | 0.01 | OrthoFinder output from all 47 species | |
| AMTR_s00066p00062930 | EMB2261,... | Pentatricopeptide repeat-containing protein At3g49170,... | 0.04 | OrthoFinder output from all 47 species | |
| AT5G59600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g07701 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16785 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g24411 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24714 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07022 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18500 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g29168 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30845 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g56368 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g26992 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g28217 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g37575 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene16549.t1 | EMB2261, Aspi01Gene16549 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene20498.t1 | CRR2, Aspi01Gene20498 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000730 | No alias | not classified & original description: CDS=1-2529 | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0012.g012931 | No alias | not classified & original description: CDS=1-3024 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0270.g061187 | No alias | not classified & original description: CDS=1-3441 | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g07614 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19054 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34770 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.29G050000.1 | Ceric.29G050000 | ssDNA-binding protein *(OSB) & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.32G071400.1 | CRR22, Ceric.32G071400 | not classified & original description: pacid=50598182... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04207 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g06287 | CRR2 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g06831 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g38857 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g15725 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ehy_g15613 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g31027 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_04886 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os05g37225.1 | LOC_Os05g37225 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Len_g24399 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_3462g0010 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g22363 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g34024 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48531 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g03798 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g38399 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g05196 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g27667 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12351 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g03779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05733 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13334 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g17170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g33298 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g42008 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0015.g006421 | No alias | not classified & original description: CDS=1-675 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0051.g013956 | No alias | not classified & original description: CDS=1-2181 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0055.g014482 | No alias | not classified & original description: CDS=1-1119 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0059.g015038 | CRR22 | not classified & original description: CDS=1-1620 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0072.g016959 | No alias | not classified & original description: CDS=1-1596 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g17518 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo92008 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g069500.1.1 | Solyc02g069500 | Pentatricopeptide repeat-containing protein At4g21300... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g096680.1.1 | REME1, Solyc12g096680 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04130 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06045 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06600 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g26293 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023289_P001 | Zm00001e023289 | Pentatricopeptide repeat-containing protein At1g31920... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 471 | 502 |
| IPR002885 | Pentatricopeptide_repeat | 175 | 198 |
| IPR032867 | DYW_dom | 618 | 710 |
| IPR046848 | E_motif | 521 | 582 |
| IPR046849 | Eplus_motif | 588 | 610 |
| IPR002885 | Pentatricopeptide_repeat | 203 | 249 |
| IPR002885 | Pentatricopeptide_repeat | 303 | 349 |
| IPR002885 | Pentatricopeptide_repeat | 406 | 450 |
| IPR002885 | Pentatricopeptide_repeat | 101 | 148 |
| No external refs found! |