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  5. Aspi01Gene36780.t2

Aspi01Gene36780.t2 (ZFN1, Aspi01Gene36780)


Aliases : ZFN1, Aspi01Gene36780

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene36780.t2
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT2G32930 ZFN2 zinc finger nuclease 2 0.03 OrthoFinder output from all 47 species
Adi_g057307 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aev_g04017 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g06112 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Gb_32584 ZFN1 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Ore_g03707 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ppi_g29535 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 260 285
IPR000571 Znf_CCCH 306 330
IPR000571 Znf_CCCH 73 96
IPR000571 Znf_CCCH 21 45
IPR000571 Znf_CCCH 118 143
No external refs found!