Aspi01Gene36520.t2 (Aspi01Gene36520)

Aliases : Aspi01Gene36520

Description : subfamily ABCG transporter & original description: none

Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene36520.t2

Target	Alias	Description	ECC score	Gene Family Method
Aop_g07219	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g21658	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12549.t2	Aspi01Gene12549	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.13G008600.1	Ceric.13G008600	subfamily ABCG transporter & original description:...	0.01	OrthoFinder output from all 47 species
Ceric.13G057300.1	ABCG26, WBC27,...	subfamily ABCG transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dde_g06815	No alias	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
LOC_Os08g07010.1	ABCG14, LOC_Os08g07010	subfamily ABCG transporter	0.01	OrthoFinder output from all 47 species
Lfl_g39753	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10428183g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Ppi_g57469	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015589	No alias	not classified & original description: CDS=22-1557	0.04	OrthoFinder output from all 47 species
Tin_g28068	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e037432_P001	ABCG26, WBC27,...	sporopollenin precursor exporter. subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	281	432
IPR013525	ABC_2_trans	619	828

External Links

No external refs found!

Aspi01Gene36520.t2 (Aspi01Gene36520)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation