Solyc01g102570.3.1 (Solyc01g102570.3)

Aliases : Solyc01g102570.3

Description : 29.2.3 protein.synthesis.initiation member of eIF3c - eukaryotic initiation factor 3c eukaryotic translation initiation factor 3C (EIF3C)

Gene families : OG_01_0003028 (Gene family) Phylogenetic Tree(s): OG0003028_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Solyc01g102570.3.1
Cluster	HCCA cluster: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000842.12	No alias	29.2.3 protein.synthesis.initiation member of eIF3c -...	0.01	Gene family
Zm00001d002166	GRMZM2G379758	29.2.3 protein.synthesis.initiation member of eIF3c -...	0.03	Gene family
Zm00001d002169	GRMZM2G115598	29.2.3 protein.synthesis.initiation member of eIF3c -...	0.03	Gene family
Zm00001d002737	GRMZM2G084062	29.2.3 protein.synthesis.initiation member of eIF3c -...	0.02	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003743	translation initiation factor activity	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEA	InterProScan
BP	GO:0006413	translational initiation	IEA	InterProScan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0031369	translation initiation factor binding	IEA	InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000717	PCI_dom	653	781
IPR008905	EIF3C_N_dom	46	645

External Links

No external refs found!

Solyc01g102570.3.1 (Solyc01g102570.3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation