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  5. Aspi01Gene36140.t1

Aspi01Gene36140.t1 (Aspi01Gene36140)


Aliases : Aspi01Gene36140

Description : squalene-hopene cyclase & original description: none


Gene families : OG0002047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene36140.t1

Target Alias Description ECC score Gene Family Method Actions
Ala_g28633 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69424 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69508 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene10453.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.1 OrthoFinder output from all 47 species
Aspi01Gene24548.t1 Aspi01Gene24548 squalene-hopene cyclase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24552.t1 Aspi01Gene24552 squalene-hopene cyclase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36061.t1 Aspi01Gene36061 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene63188.t1 ATLUP2, LUP2,... EC_5.4 intramolecular transferase & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.1Z102200.1 ATLUP2, LUP2,... squalene-hopene cyclase & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.24G077100.1 ATLUP2, LUP2,... not classified & original description: pacid=50629603... 0.01 OrthoFinder output from all 47 species
Dac_g04617 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31336 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g20110.1 No alias Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.03 OrthoFinder output from all 47 species
Nbi_g25915 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05657 No alias squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004522 ATLUP2, LUP2 squalene-hopene cyclase & original description: CDS=1-2067 0.03 OrthoFinder output from all 47 species
Spa_g28815 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032697 SQ_cyclase_N 38 324
IPR032696 SQ_cyclase_C 333 673
No external refs found!