Aspi01Gene35997.t1 (UPL1, Aspi01Gene35997)

Aliases : UPL1, Aspi01Gene35997

Description : E3 ubiquitin ligase *(UPL1) & original description: none

Gene families : OG0001042 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001042_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene35997.t1

Target	Alias	Description	ECC score	Gene Family Method
Als_g14108	UPL1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene08880.t1	UPL2, Aspi01Gene08880	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g71493	UPL1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g21858	UPL1	E3 ubiquitin ligase *(UPL1) & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01009208001	UPL2	E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os12g24080.1	UPL2, LOC_Os12g24080	monomeric E3 ubiquitin ligase (HECT)	0.03	OrthoFinder output from all 47 species
Lfl_g05050	UPL1	E3 ubiquitin ligase *(UPL1) & original description: none	0.03	OrthoFinder output from all 47 species
MA_20049g0010	UPL1	monomeric E3 ubiquitin ligase (HECT)	0.03	OrthoFinder output from all 47 species
MA_9308767g0010	UPL1	monomeric E3 ubiquitin ligase (HECT)	0.02	OrthoFinder output from all 47 species
Mp4g21620.1	UPL1	monomeric E3 ubiquitin ligase (HECT)	0.02	OrthoFinder output from all 47 species
Nbi_g15570	UPL1	E3 ubiquitin ligase *(UPL1) & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g06511	UPL1	E3 ubiquitin ligase *(UPL1) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g21189	UPL1	E3 ubiquiTin ligase *(UPL1) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000569	HECT_dom	3447	3757
IPR010314	E3_Ub_ligase_DUF913	429	779
IPR015940	UBA	1289	1326
IPR010309	E3_Ub_ligase_DUF908	214	366
IPR010309	E3_Ub_ligase_DUF908	86	203
IPR025527	HUWE1/Rev1_UBM	2716	2747
IPR025527	HUWE1/Rev1_UBM	2676	2708
IPR025527	HUWE1/Rev1_UBM	2639	2664

External Links

No external refs found!