- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Aspi01Gene35981
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene35981.t1 | |
| Cluster | HCCA: Cluster_9 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g083164 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g22000 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g41951 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g49175 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g12943 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g30289 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g31959 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g16640 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g24623 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g30728 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene02505.t1 | Aspi01Gene02505 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene14860.t1 | Aspi01Gene14860 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene26329.t1 | Aspi01Gene26329 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene28051.t2 | OSB3, Aspi01Gene28051 | cofactor of plastid-encoded RNA polymerase *(TAC9) &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene28610.t1 | REME1, Aspi01Gene28610 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene34702.t1 | Aspi01Gene34702 | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene37147.t1 | Aspi01Gene37147 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene49892.t1 | Aspi01Gene49892 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene52571.t1 | Aspi01Gene52571 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene54043.t1 | Aspi01Gene54043 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g06531 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06556 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07024 | OTP86 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07786 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10692 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11909 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20531 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g33742 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g34546 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34829 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g44516 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g67647 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g68955 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g75371 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G075100.1 | Ceric.30G075100 | not classified & original description: pacid=50609517... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43531 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08785 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g12787 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36056 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g37654 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g03987 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g05661 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22123 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g49994 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033389001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04783 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g15309 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18520 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19025 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g21323 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54495 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07433 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g04427 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g17699 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g17740 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28789 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g36882 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g32352 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g17591 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g22460 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33905 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g13338 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57971 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04674 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06319 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06451 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g15341 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g18475 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g18927 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29583 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g48450 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g52857 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59188 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g61597 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g02448 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g36326 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo115590 | REME1 | Pentatricopeptide repeat-containing protein At4g14820... | 0.03 | OrthoFinder output from all 47 species | |
| Smo72131 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | OrthoFinder output from all 47 species | |
| Smo81196 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g06527 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g17413 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g26720 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g44131 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 213 | 238 |
| IPR002885 | Pentatricopeptide_repeat | 616 | 640 |
| IPR002885 | Pentatricopeptide_repeat | 239 | 286 |
| IPR002885 | Pentatricopeptide_repeat | 541 | 589 |
| IPR002885 | Pentatricopeptide_repeat | 138 | 185 |
| IPR002885 | Pentatricopeptide_repeat | 440 | 488 |
| IPR002885 | Pentatricopeptide_repeat | 340 | 386 |
| IPR002885 | Pentatricopeptide_repeat | 305 | 335 |
| IPR046848 | E_motif | 659 | 707 |
| No external refs found! |