Aspi01Gene35881.t1 (TUB6, Aspi01Gene35881)

Aliases : TUB6, Aspi01Gene35881

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: none

Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene35881.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00084p00089400	TUB2,...	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.01	OrthoFinder output from all 47 species
AMTR_s00101p00135960	TUB6	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
AT1G20010	TUB5	tubulin beta-5 chain	0.04	OrthoFinder output from all 47 species
AT5G12250	TUB6	beta-6 tubulin	0.03	OrthoFinder output from all 47 species
Adi_g002835	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Adi_g015560	TUB8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g099314	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.01	OrthoFinder output from all 47 species
Adi_g101044	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Adi_g107584	TUB2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0065.g035841	TUB1	not classified & original description: CDS=1-585	0.02	OrthoFinder output from all 47 species
GSVIVT01025778001	TUB6	Tubulin beta-4 chain OS=Eleusine indica	0.03	OrthoFinder output from all 47 species
LOC_Os02g07060.1	TUB8, LOC_Os02g07060	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
LOC_Os03g01530.1	TUB8, LOC_Os03g01530	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.04	OrthoFinder output from all 47 species
Len_g12596	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Lfl_g06502	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Lfl_g06509	TUB2	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
MA_9451675g0010	TUB2	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.03	OrthoFinder output from all 47 species
Mp1g20730.1	TUB6	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Ore_g03218	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.04	OrthoFinder output from all 47 species
Ppi_g41849	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ppi_g61758	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Ppi_g63060	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Sam_g16934	No alias	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Smo231661	TUB2	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.01	OrthoFinder output from all 47 species
Smo79202	TUB2	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.01	OrthoFinder output from all 47 species
Tin_g19305	TUB7	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Zm00001e039740_P001	TUB9, Zm00001e039740	Tubulin beta-7 chain OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species
Zm00001e042329_P001	TUB9, Zm00001e042329	Tubulin beta-7 chain OS=Oryza sativa subsp. japonica...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	266	387
IPR003008	Tubulin_FtsZ_GTPase	3	216

External Links

No external refs found!

Aspi01Gene35881.t1 (TUB6, Aspi01Gene35881)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation