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  5. Solyc01g100720.3.1

Solyc01g100720.3.1 (Solyc01g100720.3)


Aliases : Solyc01g100720.3

Description : 29.3.1 protein.targeting.nucleus Protein interacts with Agrobacterium proteins VirD2 and VirE2. importin alpha isoform 4 (IMPA-4)


Gene families : OG_01_0000716 (Gene family) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g100720.3.1
Cluster HCCA cluster: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
AT3G06720 IMPA-1, IMPA1,... importin alpha isoform 1 0.01 Gene family
Cre04.g215850 No alias 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.04 Gene family
GSVIVT01028079001 No alias 29.3.1 protein.targeting.nucleus Protein interacts with... 0.07 Gene family
GSVIVT01031205001 No alias 29.3.1 protein.targeting.nucleus Protein interacts with... 0.03 Gene family
LOC_Os05g06350 Os05g0155500,... 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.05 Gene family
Smo266556 PACid_15409102 No description available 0.04 Gene family
Zm00001d009850 GRMZM2G088088 29.3.1 protein.targeting.nucleus Encodes importin alpha... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002652 Importin-a_IBB 12 97
IPR032413 Arm_3 459 505
IPR000225 Armadillo 151 189
IPR000225 Armadillo 362 400
IPR000225 Armadillo 404 442
IPR000225 Armadillo 108 148
IPR000225 Armadillo 318 359
IPR000225 Armadillo 246 274
IPR000225 Armadillo 277 315
IPR000225 Armadillo 192 233
No external refs found!