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  5. Aspi01Gene35343.t1

Aspi01Gene35343.t1 (Aspi01Gene35343)


Aliases : Aspi01Gene35343

Description : not classified & original description: none


Gene families : OG0006545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene35343.t1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT3G23020 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
Aspi01Gene35344.t1 Aspi01Gene35344 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.27G000500.1 Ceric.27G000500 not classified & original description: pacid=50606226... 0.01 OrthoFinder output from all 47 species
Dcu_g09918 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Smo77736 No alias Pentatricopeptide repeat-containing protein At3g23020... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 139 184
IPR002885 Pentatricopeptide_repeat 288 334
IPR002885 Pentatricopeptide_repeat 220 264
IPR002885 Pentatricopeptide_repeat 613 657
IPR002885 Pentatricopeptide_repeat 684 722
IPR002885 Pentatricopeptide_repeat 582 608
IPR002885 Pentatricopeptide_repeat 411 428
IPR033443 PPR_long 456 572
No external refs found!