Solyc01g100380.3.1 (Solyc01g100380.3)


Aliases : Solyc01g100380.3

Description : 30.3 signalling.calcium Encodes one of three Arabidopsis calreticulins. calreticulin 1b (CRT1b)


Gene families : OG_01_0001383 (Gene family) Phylogenetic Tree(s): OG0001383_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g100380.3.1
Cluster HCCA cluster: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
AT1G09210 CRT1b, AtCRT1b calreticulin 1b 0.08 Gene family
AT1G56340 AtCRT1a, CRT1a, CRT1 calreticulin 1a 0.09 Gene family
Cre01.g038400 No alias 30.3 signalling.calcium Encodes one of three Arabidopsis... 0.02 Gene family
LOC_Os03g61670 Os03g0832200 30.3 signalling.calcium Encodes one of three Arabidopsis... 0.11 Gene family
LOC_Os07g14270 Os07g0246200 30.3 signalling.calcium Encodes one of three Arabidopsis... 0.08 Gene family
Smo144212 PACid_15416865 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan
CC GO:0005783 endoplasmic reticulum IEA InterProScan
BP GO:0006457 protein folding IEA InterProScan
MF GO:0051082 unfolded protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001580 Calret/calnex 31 266
IPR001580 Calret/calnex 268 341
No external refs found!