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  5. Aspi01Gene35048.t1

Aspi01Gene35048.t1 (Aspi01Gene35048)


Aliases : Aspi01Gene35048

Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene35048.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00098p00167700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g50390,... 0.02 OrthoFinder output from all 47 species
Ala_g03700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25155 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16770 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g26509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048709 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2400 0.01 OrthoFinder output from all 47 species
Azfi_s0292.g063377 OTP86 not classified & original description: CDS=1-2337 0.01 OrthoFinder output from all 47 species
Azfi_s2068.g108965 No alias not classified & original description: CDS=97-387 0.01 OrthoFinder output from all 47 species
Cba_g29976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G026900.1 Ceric.11G026900 not classified & original description: pacid=50595788... 0.03 OrthoFinder output from all 47 species
Ceric.35G007000.1 Ceric.35G007000 not classified & original description: pacid=50581130... 0.03 OrthoFinder output from all 47 species
Dcu_g48807 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g08120.1 OTP81, LOC_Os01g08120 RNA editing factor (OTP81) 0.01 OrthoFinder output from all 47 species
Len_g34134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_114565g0020 OTP84 Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species
Nbi_g22160 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24038 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g05115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011866 No alias not classified & original description: CDS=1-2421 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014790 No alias not classified & original description: CDS=1-2049 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017838 No alias component *(CAL) of NADH dehydrogenase carbonic... 0.03 OrthoFinder output from all 47 species
Sam_g06265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g15522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g20273 LPA66 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 145 193
No external refs found!