Solyc01g100220.3.1 (Solyc01g100220.3)


Aliases : Solyc01g100220.3

Description : 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 17 (GATA17)


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc01g100220.3.1
Cluster HCCA cluster: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT3G06740 GATA15 GATA transcription factor 15 0.05 Gene family
GSVIVT01018951001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
GSVIVT01035614001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os06g37450 Os06g0571800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.01 Gene family
MA_10434815g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.01 Gene family
MA_10436047g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.01 Gene family
MA_110551g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Solyc02g084590.3.1 Solyc02g084590.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Solyc02g085190.2.1 Solyc02g085190.2 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
Solyc03g120890.3.1 Solyc03g120890.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d009668 GRMZM2G397616 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Zm00001d011771 GRMZM2G138967 No description available 0.02 Gene family
Zm00001d034751 GRMZM2G114775 No description available 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 21 54
No external refs found!