Aspi01Gene34893.t1 (OBP4, Aspi01Gene34893)

Aliases : OBP4, Aspi01Gene34893

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene34893.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00049300	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AMTR_s00119p00099150	CDF2,...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
AMTR_s00160p00046100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
AT1G29160	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT1G47655	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT2G28810	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT3G45610	No alias	Dof-type zinc finger DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT4G38000	DOF4.7	DNA binding with one finger 4.7	0.03	OrthoFinder output from all 47 species
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.02	OrthoFinder output from all 47 species
AT5G60200	TMO6	TARGET OF MONOPTEROS 6	0.04	OrthoFinder output from all 47 species
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.05	OrthoFinder output from all 47 species
Adi_g110724	No alias	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g22545	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g25388	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene37574.t1	OBP3, Aspi01Gene37574	transcription factor *(DOF) & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0004.g008799	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1614	0.03	OrthoFinder output from all 47 species
Azfi_s0008.g011464	No alias	not classified & original description: CDS=1-2679	0.03	OrthoFinder output from all 47 species
Azfi_s0166.g054389	TMO6	transcription factor *(DOF) & original description: CDS=1-1341	0.01	OrthoFinder output from all 47 species
Cba_g36947	OBP3	transcription factor *(DOF) & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.11G069300.1	TMO6, Ceric.11G069300	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.14G083700.1	OBP4, Ceric.14G083700	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.22G032900.1	TMO6, Ceric.22G032900	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.24G054400.1	Ceric.24G054400	transcription factor *(DOF) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.31G015700.1	TMO6, Ceric.31G015700	transcription factor *(DOF) & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g43968	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g06183	OBP4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g31456	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g28279	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01002242001	ADOF2, DOF2	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
LOC_Os02g15350.1	LOC_Os02g15350	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os03g16850.1	OBP3, LOC_Os03g16850	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os04g47990.1	LOC_Os04g47990	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Lfl_g05583	CDF3	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g22103	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g05846	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g32243	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g05506	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g18526	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g32527	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g60948	CDF3	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g03743	ADOF1, DOF1	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06804	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008681	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=453-2084	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g008984	No alias	transcription factor *(DOF) & original description: CDS=332-1984	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023637	CDF3	transcription factor *(DOF) & original description: CDS=1-1434	0.03	OrthoFinder output from all 47 species
Solyc02g077960.3.1	TMO6, Solyc02g077960	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc11g010940.2.1	Solyc11g010940	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Spa_g07056	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g49274	CDF2	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g49511	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g23610	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g28492	CDF2	transcription factor *(DOF) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e001988_P001	TMO6, Zm00001e001988	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e012824_P001	CDF1, Zm00001e012824	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e019172_P001	Zm00001e019172	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	30	86

External Links

No external refs found!

Aspi01Gene34893.t1 (OBP4, Aspi01Gene34893)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation