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  5. Aspi01Gene34559.t1

Aspi01Gene34559.t1 (Aspi01Gene34559)


Aliases : Aspi01Gene34559

Description : not classified & original description: none


Gene families : OG0001367 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001367_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene34559.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00037390 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00044p00128270 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00128640 evm_27.TU.AmTr_v1... Probable F-box protein At4g22030 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT4G04480 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.07 OrthoFinder output from all 47 species
AT4G22030 No alias F-box family protein with a domain of unknown function (DUF295) 0.04 OrthoFinder output from all 47 species
Ala_g35971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0334.g065497 No alias not classified & original description: CDS=1-1488 0.04 OrthoFinder output from all 47 species
Ceric.1Z099600.1 Ceric.1Z099600 not classified & original description: pacid=50573463... 0.04 OrthoFinder output from all 47 species
Ceric.1Z099700.1 Ceric.1Z099700 not classified & original description: pacid=50573460... 0.03 OrthoFinder output from all 47 species
Ceric.1Z099800.1 Ceric.1Z099800 not classified & original description: pacid=50573466... 0.04 OrthoFinder output from all 47 species
Ceric.1Z159800.1 Ceric.1Z159800 not classified & original description: pacid=50567680... 0.03 OrthoFinder output from all 47 species
Ceric.1Z159900.1 Ceric.1Z159900 not classified & original description: pacid=50567683... 0.03 OrthoFinder output from all 47 species
Ceric.1Z228600.1 Ceric.1Z228600 not classified & original description: pacid=50606299... 0.03 OrthoFinder output from all 47 species
Dac_g32097 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17786 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g17788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_15744 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_15745 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_15746 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp5g00980.1 No alias Probable F-box protein At4g22030 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0213.g025971 No alias not classified & original description: CDS=1-1506 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027949 Chloroplast_duf 147 290
No external refs found!