Aspi01Gene34308.t1 (WTF1, AtWTF1, Aspi01Gene34308)

Aliases : WTF1, AtWTF1, Aspi01Gene34308

Description : plastidial RNA basal splicing factor *(WTF1) & original description: none

Gene families : OG0001240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001240_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene34308.t1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00268210	evm_27.TU.AmTr_v1...	Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00021p00241290	WTF1, AtWTF1,...	RNA processing.organelle machineries.RNA...	0.02	OrthoFinder output from all 47 species
Ala_g12370	WTF1, AtWTF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g00882	WTF1, AtWTF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g22101	WTF1, AtWTF1	plastidial RNA basal splicing factor *(WTF1) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g01485	WTF1, AtWTF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01031655001	emb1692	Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa...	0.01	OrthoFinder output from all 47 species
LOC_Os05g49610.1	WTF1, AtWTF1,...	WTF1 plastidial RNA basal splicing factor	0.02	OrthoFinder output from all 47 species
MA_10436026g0010	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Pir_g09523	WTF1, AtWTF1	plastidial RNA basal splicing factor *(WTF1) & original...	0.04	OrthoFinder output from all 47 species
Ppi_g33355	WTF1, AtWTF1	plastidial RNA basal splicing factor *(WTF1) & original...	0.03	OrthoFinder output from all 47 species
Sam_g09594	No alias	plastidial RNA basal splicing factor *(WTF1) & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR021099	PORR_domain	57	384

External Links

No external refs found!