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  5. Aspi01Gene34222.t1

Aspi01Gene34222.t1 (Aspi01Gene34222)


Aliases : Aspi01Gene34222

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene34222.t1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AT3G09040 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g06818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07409 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08304 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31781.t1 Aspi01Gene31781 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene72928.t1 Aspi01Gene72928 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21668 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50253 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
Len_g23812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23967 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35029 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo82058 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 220 245
IPR002885 Pentatricopeptide_repeat 18 41
IPR002885 Pentatricopeptide_repeat 422 444
IPR046848 E_motif 463 525
IPR002885 Pentatricopeptide_repeat 43 90
IPR002885 Pentatricopeptide_repeat 144 191
IPR002885 Pentatricopeptide_repeat 246 292
IPR002885 Pentatricopeptide_repeat 346 393
No external refs found!