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Aliases : CRR22, Aspi01Gene34036
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aspi01Gene34036.t1 | |
| Cluster | HCCA: Cluster_32 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00246970 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00053p00090700 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g13880... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G24000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT4G25270 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058262 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067822 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g112114 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24046 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g04456 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06307 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19051 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07366 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g09402 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aob_g28633 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g30728 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009353 | No alias | not classified & original description: CDS=1-2883 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0127.g048709 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2400 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0134.g049391 | No alias | not classified & original description: CDS=1-2007 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0410.g068507 | No alias | not classified & original description: CDS=1-2022 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07018 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g15323 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g34546 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g70181 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G062400.1 | Ceric.13G062400 | not classified & original description: pacid=50636814... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G049100.1 | Ceric.18G049100 | not classified & original description: pacid=50621467... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.28G052000.1 | OTP86, Ceric.28G052000 | not classified & original description: pacid=50569960... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.29G024800.1 | Ceric.29G024800 | not classified & original description: pacid=50625545... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08450 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g49796 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g03570 | EMB2758 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g04001 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21688 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g24358 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g25197 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g08120.1 | OTP81, LOC_Os01g08120 | RNA editing factor (OTP81) | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os01g46230.1 | MEF1, LOC_Os01g46230 | RNA editing factor (MEF1) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g39650.1 | LOC_Os06g39650 | Pentatricopeptide repeat-containing protein At1g31430... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g44142 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_408185g0010 | No alias | Pentatricopeptide repeat-containing protein At2g33760... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15698 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g12341 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g23541 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g35928 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g41642 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g63827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03847 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g27694 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g11085 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g16488 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53952 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g57817 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59333 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g59346 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008527 | OTP84 | borate transporter *(BOR) & original description: CDS=118-8541 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g010984 | No alias | not classified & original description: CDS=1-2295 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0055.g014482 | No alias | not classified & original description: CDS=1-1119 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0110.g020618 | REME1 | not classified & original description: CDS=24-1478 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g28894 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33092 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g48011 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g49086 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50768 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51766 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g47634 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50388 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g43996 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 491 | 539 |
| IPR002885 | Pentatricopeptide_repeat | 88 | 136 |
| IPR002885 | Pentatricopeptide_repeat | 390 | 439 |
| IPR002885 | Pentatricopeptide_repeat | 290 | 336 |
| IPR002885 | Pentatricopeptide_repeat | 188 | 235 |
| IPR002885 | Pentatricopeptide_repeat | 162 | 184 |
| IPR002885 | Pentatricopeptide_repeat | 263 | 288 |
| No external refs found! |