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  5. Aspi01Gene34023.t1

Aspi01Gene34023.t1 (Aspi01Gene34023)


Aliases : Aspi01Gene34023

Description : Globulin-type seed storage protein & original description: none


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene34023.t1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01028337001 CRU1, CRA1, ATCRA1 11S globulin subunit beta OS=Cucurbita maxima 0.03 OrthoFinder output from all 47 species
GSVIVT01028338001 CRU3, CRC 11S globulin subunit beta OS=Cucurbita maxima 0.03 OrthoFinder output from all 47 species
Gb_30214 CRU1, CRA1, ATCRA1 no description available(sp|a0a1l6k371|jugn4_jugni : 301.0) 0.03 OrthoFinder output from all 47 species
LOC_Os08g03410.1 CRU1, CRA1,... no description available(sp|a0a222nnm9|cos1_cocnu : 326.0) 0.03 OrthoFinder output from all 47 species
LOC_Os09g37976.1 LOC_Os09g37976 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g04135 CRU3, CRC not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43216 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25554 No alias Globulin-type seed storage protein *(CR) & original... 0.05 OrthoFinder output from all 47 species
Pnu_g25636 No alias Globulin-type seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g094110.3.1 Solyc01g094110 13S globulin seed storage protein 2 OS=Fagopyrum... 0.02 OrthoFinder output from all 47 species
Solyc01g104100.3.1 Solyc01g104100 no description available(sp|a0a222nnm9|cos1_cocnu : 83.2) 0.03 OrthoFinder output from all 47 species
Solyc03g005580.2.1 CRU1, CRA1,... no description available(sp|a0a1l6k371|jugn4_jugni : 439.0) 0.03 OrthoFinder output from all 47 species
Solyc09g025210.3.1 CRU1, CRA1,... no description available(sp|q2tpw5|jugr4_jugre : 424.0) 0.03 OrthoFinder output from all 47 species
Tin_g18476 CRU2, CRB Globulin-type seed storage protein *(CR) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e027621_P002 Zm00001e027621 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006045 Cupin_1 18 128
IPR006045 Cupin_1 211 357
No external refs found!