Aspi01Gene33577.t1 (PUB14, ATPUB14,...)

Aliases : PUB14, ATPUB14, Aspi01Gene33577

Description : not classified & original description: none

Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene33577.t1

Target	Alias	Description	ECC score	Gene Family Method
Als_g26320	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene44183.t1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene44184.t1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene44185.t1	ATPUB17, PUB17,...	E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene59239.t1	PUB14, ATPUB14,...	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ceric.10G010200.1	Ceric.10G010200	not classified & original description: pacid=50612946...	0.02	OrthoFinder output from all 47 species
Ceric.13G093000.1	ATPUB17, PUB17,...	not classified & original description: pacid=50635700...	0.03	OrthoFinder output from all 47 species
Ceric.26G012900.1	Ceric.26G012900	not classified & original description: pacid=50598948...	0.02	OrthoFinder output from all 47 species
Dac_g23493	PUB18, ATPUB18	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06975	ATPUB17, PUB17	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_08792	ATPUB17, PUB17	U-box domain-containing protein 1 OS=Medicago truncatula...	0.02	OrthoFinder output from all 47 species
MA_69133g0010	PUB14, ATPUB14	E3 ubiquitin ligase (PUB)	0.01	OrthoFinder output from all 47 species
Spa_g11467	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g11468	PUB14, ATPUB14	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	66	132

External Links

No external refs found!

Aspi01Gene33577.t1 (PUB14, ATPUB14,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation