Aspi01Gene33358.t1 (PUB44, SAUL1,...)


Aliases : PUB44, SAUL1, ATPUB44, Aspi01Gene33358

Description : E3 ubiquitin ligase *(SAUL) & original description: none


Gene families : OG0001077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene33358.t1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene26215.t1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g13472 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20055 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013395001 PUB44, SAUL1, ATPUB44 Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os03g45420.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
LOC_Os12g17900.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Ore_g10210 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15288 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55795 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02165 No alias E3 ubiquiTin ligase *(SAUL) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 592 661
IPR003613 Ubox_domain 255 328
No external refs found!