Aspi01Gene33255.t1 (EST3, MRP4, ATMRP4,...)

Aliases : EST3, MRP4, ATMRP4, ABCC4, Aspi01Gene33255

Description : subfamily ABCC transporter & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene33255.t1
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AT3G13080	ABCC3, ATMRP3, MRP3	multidrug resistance-associated protein 3	0.02	OrthoFinder output from all 47 species
AT3G13090	ATMRP8, MRP8, ABCC6	multidrug resistance-associated protein 8	0.02	OrthoFinder output from all 47 species
Als_g07445	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g09219	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.06	OrthoFinder output from all 47 species
Als_g16130	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g67851	ABCC12, MRP13, ATMRP13	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g06591	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g12503	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g13434	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g16291	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g17215	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.06	OrthoFinder output from all 47 species
Cba_g31869	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g74175	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g08766	AtABCC2, ABCC2,...	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g39648	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g17277	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g47716	MRP10, ATMRP10, ABCC14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g49210	ABCC12, MRP13, ATMRP13	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01028722001	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Len_g38553	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Mp5g13220.1	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Mp5g13230.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000201	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=319-4200	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000455	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: CDS=190-4836	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001693	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: CDS=1-1395	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016579	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: CDS=1-4848	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024424	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: CDS=1-4845	0.04	OrthoFinder output from all 47 species
Sam_g17500	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Zm00001e034300_P001	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Zm00001e038918_P002	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	986	1210
IPR011527	ABC1_TM_dom	323	591
IPR003439	ABC_transporter-like_ATP-bd	655	788
IPR003439	ABC_transporter-like_ATP-bd	1299	1447

External Links

No external refs found!

Aspi01Gene33255.t1 (EST3, MRP4, ATMRP4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation