Aspi01Gene33144.t2 (ATRDRP1, RDR1, Aspi01Gene33144)

Aliases : ATRDRP1, RDR1, Aspi01Gene33144

Description : not classified & original description: none

Gene families : OG0001039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001039_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aspi01Gene33144.t2

Target	Alias	Description	ECC score	Gene Family Method
Ala_g16854	SDE1, RDR6, SGS2	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Als_g11966	SDE1, RDR6, SGS2	ssRNA polymerase *(RDR6) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene17564.t1	SDE1, RDR6,...	ssRNA polymerase *(RDR6) & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene25332.t1	ATRDRP1, RDR1,...	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g12890	ATRDRP1, RDR1	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020904.19	SMD1, RDR2	Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Dde_g51705	ATRDRP1, RDR1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g02005	ATRDRP1, RDR1	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	36	94
IPR007855	RNA-dep_RNA_pol_euk-typ	411	998

External Links

No external refs found!