Aspi01Gene33056.t1 (Aspi01Gene33056)


Aliases : Aspi01Gene33056

Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene33056.t1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00061490 RHC1A,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT1G18770 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G60360 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G13430 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G15820 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g020451 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g103586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05398 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ala_g06570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14792 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g44017 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g01998 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Aob_g27273 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aop_g29180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63212.t1 Aspi01Gene63212 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63558.t1 Aspi01Gene63558 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G095600.1 Ceric.07G095600 not classified & original description: pacid=50626992... 0.01 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.04 OrthoFinder output from all 47 species
Dac_g07739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03848 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g03388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01134 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g01160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03331 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g05901 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g11152 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g27311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_22124 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.01 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_30381 RHC1A Probable E3 ubiquitin-protein ligase RHC2A... 0.03 OrthoFinder output from all 47 species
LOC_Os01g44240.1 LOC_Os01g44240 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g20870.1 LOC_Os03g20870 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Len_g07549 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Len_g16162 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Len_g22017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29620 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Lfl_g40832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_78640g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.07 OrthoFinder output from all 47 species
MA_8499g0020 CIP8 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g14693 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g13924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10219 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ore_g15069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12845 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Pir_g24146 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g36158 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g36482 ATCRT1 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pnu_g16883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000146 No alias not classified & original description: CDS=228-1322 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002229 No alias not classified & original description: CDS=1-1332 0.05 OrthoFinder output from all 47 species
Sam_g17099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g008440.1.1 Solyc12g008440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g00737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003411_P001 Zm00001e003411 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e010857_P001 Zm00001e010857 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027319_P001 Zm00001e027319 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e038273_P001 Zm00001e038273 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 291 333
IPR001841 Znf_RING 56 98
No external refs found!