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  5. Aspi01Gene32907.t1

Aspi01Gene32907.t1 (Aspi01Gene32907)


Aliases : Aspi01Gene32907

Description : putative silicon efflux transporter *(LSI2) & original description: none


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aspi01Gene32907.t1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00226220 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.02 OrthoFinder output from all 47 species
Als_g33400 No alias putative silicon efflux transporter *(LSI2) & original... 0.04 OrthoFinder output from all 47 species
Aob_g24646 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Aop_g23883 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g41359 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g01700.1 LOC_Os03g01700 putative silicon efflux transporter (LSI2) 0.04 OrthoFinder output from all 47 species
MA_10272693g0010 No alias Silicon efflux transporter LSI3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Smo98013 No alias Solute transport.carrier-mediated transport.IT... 0.03 OrthoFinder output from all 47 species
Spa_g11339 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Spa_g17067 No alias putative silicon efflux transporter *(LSI2) & original... 0.01 OrthoFinder output from all 47 species
Spa_g47898 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e000055_P001 Zm00001e000055 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species
Zm00001e023569_P001 Zm00001e023569 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 24 204
No external refs found!