AMTR_s00110p00030150 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00110.8

Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0016858 (SeedPlants) Phylogenetic Tree(s): OG_03_0016858_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00110p00030150
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.03 Archaeplastida
LOC_Os12g41650.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 Archaeplastida
Mp3g17350.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.02 LandPlants
GSVIVT01020814001 No alias External stimuli response.light.red/far red light.PIF... 0.03 LandPlants
LOC_Os12g41650.2 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 LandPlants
Mp3g17350.1 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 244 291
No external refs found!